Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018270.1 Corchorus olitorius cultivar O-4 contig18303, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23248

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
703--757
2
30.0
2
79
17
66
49
0
1
49
1.11
1309--1402
45
2.2
44
86
7
131
38
19
5
37
1.74
11350--11391
19
2.2
19
100
0
84
50
26
4
19
1.67
18352--18390
18
2.2
18
85
0
51
30
5
23
41
1.76
18817--18844
8
3.5
8
100
0
56
75
0
10
14
1.06
19221--19291
16
4.6
16
70
19
53
78
11
1
8
1.01
19223--19266
15
2.9
15
83
12
54
79
11
2
6
1.01
19222--19278
23
2.3
25
73
11
64
80
10
1
7
0.96
19235--19292
12
4.8
12
74
23
50
79
10
0
10
0.94
20838--21060
110
2.0
110
94
0
392
25
24
15
34
1.95
21131--21456
102
3.2
102
91
1
492
28
17
14
38
1.90
21471--21545
25
3.2
25
65
18
70
26
25
18
29
1.98
21792--22276
30
16.2
30
87
0
675
18
14
20
45
1.84
22804--22855
27
2.0
26
85
11
70
15
13
26
44
1.84

Tables:   1

The End!