Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018274.1 Corchorus olitorius cultivar O-4 contig18307, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7301

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2626--2885
30
8.6
30
91
1
369
29
19
20
30
1.97
2628--3207
60
9.8
60
87
5
638
28
20
19
31
1.97
2628--3207
90
6.6
89
84
7
625
28
20
19
31
1.97
2865--2904
19
2.0
20
90
4
64
25
22
22
30
1.99
2885--3208
30
10.8
30
95
0
522
27
20
18
33
1.96
3316--3351
18
2.0
18
88
0
54
50
25
13
11
1.75
4266--4319
22
2.3
24
81
12
60
24
22
5
48
1.72
4415--4578
84
2.0
81
88
4
240
28
19
8
43
1.80
4946--4998
13
3.7
14
87
7
54
39
20
5
33
1.76
6328--6391
33
1.9
33
87
6
94
43
15
6
34
1.72
6954--6982
8
3.8
8
90
9
51
20
0
0
79
0.74

Tables:   1

The End!