Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018275.1 Corchorus olitorius cultivar O-4 contig18308, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9193

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2314--2338
2
12.5
2
100
0
50
48
0
0
52
1.00
3345--3407
32
2.0
32
100
0
126
50
15
0
33
1.45
3849--3884
18
2.0
18
88
0
54
47
25
13
13
1.80
5469--5497
3
9.7
3
100
0
58
31
0
34
34
1.58
6559--6587
13
2.3
13
94
5
51
24
27
13
34
1.93
6664--6692
13
2.3
13
94
5
51
24
27
13
34
1.93
6509--6712
105
1.9
105
100
0
408
26
21
11
40
1.88

Tables:   1

The End!