Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018280.1 Corchorus olitorius cultivar O-4 contig18313, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33398

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--83
25
3.3
25
89
0
121
28
27
19
24
1.98
892--931
16
2.5
16
91
0
71
22
27
12
37
1.90
6184--6240
25
2.4
24
88
5
80
61
3
5
29
1.35
6999--7190
105
1.8
105
88
1
269
52
3
10
33
1.52
8851--8921
37
1.9
37
94
0
124
50
7
29
12
1.66
30349--31216
331
2.6
324
77
11
811
39
14
13
32
1.85
32694--32737
16
2.8
16
89
0
70
36
40
15
6
1.74
32859--32885
2
13.5
2
100
0
54
51
0
0
48
1.00
33129--33200
31
2.3
31
75
17
78
26
4
8
61
1.43

Tables:   1

The End!