Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018281.1 Corchorus olitorius cultivar O-4 contig18314, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13373

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76--122
13
3.8
12
78
13
51
40
0
4
55
1.19
251--326
17
4.4
18
81
8
95
25
51
19
3
1.64
280--327
23
2.1
23
96
0
87
27
50
16
6
1.69
316--407
16
5.8
16
73
14
91
36
39
15
8
1.78
251--327
6
13.3
6
74
8
70
25
50
19
3
1.64
317--406
32
2.8
32
91
5
146
36
38
15
8
1.79
298--421
32
3.8
31
81
5
122
32
43
16
7
1.76
437--1984
658
2.3
658
81
5
1773
37
14
13
34
1.86
437--1998
331
4.7
327
79
6
1499
37
14
14
34
1.86
2349--2378
15
1.9
16
93
6
53
53
3
0
43
1.17
2630--2673
5
9.2
5
90
9
74
56
0
20
22
1.42
10478--11988
333
4.6
331
81
6
1539
34
13
14
37
1.86
12711--12746
2
18.5
2
88
5
56
47
0
2
50
1.15

Tables:   1

The End!