Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018308.1 Corchorus olitorius cultivar O-4 contig18341, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25491

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1530--1673
76
1.9
76
80
8
168
17
29
29
24
1.97
8288--8330
22
2.0
22
86
9
61
39
18
11
30
1.86
14386--14413
2
14.0
2
100
0
56
50
0
50
0
1.00
24616--24694
39
2.0
39
100
0
158
54
12
10
22
1.68
24686--24727
6
7.3
6
86
10
52
38
0
11
50
1.40
24687--24731
16
2.8
16
93
0
72
35
0
13
51
1.41
24693--24731
10
3.9
10
89
0
51
33
0
15
51
1.44

Tables:   1

The End!