Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018311.1 Corchorus olitorius cultivar O-4 contig18344, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21972

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1684--1750
31
2.1
32
84
13
86
37
29
19
13
1.90
4675--4723
24
2.0
24
84
7
64
32
0
8
59
1.27
5009--5066
29
2.0
29
89
3
89
39
5
5
50
1.47
6097--6159
33
1.9
33
90
0
99
28
4
19
47
1.69
9378--9486
52
2.1
52
100
0
218
41
5
14
38
1.69
13242--13272
15
2.1
15
93
0
53
0
35
0
64
0.94
13455--13486
4
7.8
4
93
6
55
0
21
0
78
0.76
16698--16753
28
2.0
28
92
0
94
26
16
25
32
1.96

Tables:   1

The End!