Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018318.1 Corchorus olitorius cultivar O-4 contig18351, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22752

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
327--429
31
3.5
31
65
15
81
16
18
31
33
1.93
323--510
58
3.2
57
87
4
245
17
18
33
30
1.94
1946--2121
86
2.0
86
93
0
298
14
25
27
32
1.94
2183--2243
24
2.6
24
78
2
70
8
26
36
29
1.85
2491--2920
28
15.4
28
74
8
259
18
27
25
28
1.98
2491--2920
56
7.7
56
74
6
327
18
27
25
28
1.98
2489--2920
84
5.2
84
79
5
286
18
27
25
28
1.98
2484--2965
167
2.9
165
86
4
592
18
26
25
28
1.98
2712--2965
56
4.5
57
69
12
168
21
25
25
26
2.00
3744--3844
31
3.4
31
62
20
79
13
18
32
34
1.91
3738--3985
58
4.3
58
92
1
302
16
19
33
30
1.94
8001--8290
144
2.0
146
91
3
469
38
13
25
23
1.91
19300--22486
332
9.7
330
76
8
2140
37
15
13
32
1.87
22575--22601
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!