Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018320.1 Corchorus olitorius cultivar O-4 contig18353, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29721

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6730--6759
14
2.2
14
94
5
53
56
20
10
13
1.65
6985--7014
15
2.0
15
100
0
60
26
13
6
53
1.64
27346--27514
22
7.8
21
75
7
124
34
14
12
38
1.84
27367--27493
66
1.9
66
85
0
173
35
14
13
37
1.85
27346--27516
44
3.9
44
78
9
145
34
15
12
38
1.84
27778--27805
2
14.0
2
100
0
56
50
0
0
50
1.00
28196--28268
28
2.6
28
89
2
103
20
17
21
39
1.92

Tables:   1

The End!