Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018325.1 Corchorus olitorius cultivar O-4 contig18358, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13648

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6034--6206
90
1.9
90
95
1
296
65
0
9
25
1.22
6069--6227
44
3.8
37
75
21
122
65
0
9
25
1.22
6034--6206
46
3.8
46
91
3
289
65
0
9
25
1.22
7751--8032
107
2.6
107
85
7
358
34
22
15
27
1.95
7729--8030
161
1.9
161
82
4
385
33
22
16
27
1.95
7729--8038
54
5.8
53
81
3
325
35
21
15
27
1.94
8017--8505
37
13.4
37
88
4
692
43
17
11
26
1.84
8017--8505
181
2.7
182
89
5
711
43
17
11
26
1.84
8017--8505
218
2.2
217
89
3
732
43
17
11
26
1.84
8554--8813
54
4.8
54
86
3
337
34
18
15
31
1.92
11763--11842
39
2.1
38
83
6
99
40
11
20
28
1.86
13319--13514
4
50.8
4
62
19
51
65
0
9
25
1.22
13316--13487
90
1.9
90
95
2
296
65
0
9
25
1.22
13351--13508
44
3.8
37
76
20
129
65
0
9
25
1.23
13316--13487
46
3.8
46
91
4
289
65
0
9
25
1.22

Tables:   1

The End!