Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018329.1 Corchorus olitorius cultivar O-4 contig18362, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15713

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3315--3345
12
2.6
12
94
0
53
90
0
9
0
0.46
3315--3354
17
2.4
17
91
4
64
87
0
12
0
0.54
3315--3352
11
3.5
11
79
13
51
89
0
10
0
0.49
5018--5062
6
7.7
6
82
5
56
80
0
17
2
0.82
5020--5062
11
3.8
11
81
6
50
81
0
16
2
0.79
5020--5066
17
2.8
17
78
15
53
78
0
17
4
0.90
5341--5380
20
2.0
20
100
0
80
35
25
20
20
1.96
7134--7175
21
2.0
21
100
0
84
28
4
19
47
1.69
10973--11036
3
20.0
3
75
12
56
59
0
34
6
1.23
10973--11026
23
2.3
23
96
0
99
55
0
37
7
1.28
15672--15713
2
21.0
2
100
0
84
50
0
0
50
1.00

Tables:   1

The End!