Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018335.1 Corchorus olitorius cultivar O-4 contig18368, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10985

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
367--393
2
13.5
2
100
0
54
51
0
0
48
1.00
2225--2318
22
4.3
21
79
11
100
41
17
9
31
1.81
2331--2431
22
4.6
22
75
9
82
43
15
6
33
1.74
2572--2720
22
6.8
21
68
13
68
36
12
8
42
1.73
2704--2786
22
3.8
22
73
6
87
37
10
13
38
1.79
3220--3358
69
2.0
70
94
1
244
20
16
21
41
1.91
4316--4355
15
2.5
17
88
8
57
62
2
0
35
1.09
8126--8172
24
1.9
25
86
4
69
36
14
8
40
1.77

Tables:   1

The End!