Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018338.1 Corchorus olitorius cultivar O-4 contig18371, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41324

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4030--4068
5
7.6
5
82
5
51
2
20
58
17
1.50
4030--4070
21
2.0
20
90
4
64
2
24
56
17
1.53
8816--8958
72
2.0
72
100
0
286
23
16
12
47
1.81
16455--16748
30
9.7
30
90
1
426
29
19
20
30
1.97
16455--16847
30
12.6
32
84
4
190
31
18
18
31
1.95
18860--18923
33
1.9
33
87
0
92
31
23
20
25
1.98
34872--35071
99
2.0
99
100
0
400
54
12
13
21
1.70
34879--35029
48
3.1
47
63
25
114
55
11
11
20
1.67
37353--37379
14
1.9
14
100
0
54
0
0
11
88
0.50

Tables:   1

The End!