Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018341.1 Corchorus olitorius cultivar O-4 contig18374, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20609

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6728--6758
12
2.6
12
100
0
62
38
25
0
35
1.56
7059--7121
29
2.2
28
78
13
65
30
25
1
42
1.64
8264--8297
2
17.0
2
100
0
68
50
0
0
50
1.00
9154--9238
24
2.8
32
67
29
87
30
7
20
42
1.78
19456--19538
7
11.9
7
96
0
139
16
0
25
57
1.39
19672--19749
33
2.4
33
91
0
120
32
6
17
43
1.75
19760--19896
55
2.5
55
82
11
140
32
21
17
29
1.96
19787--19929
55
2.6
54
82
7
155
32
20
17
28
1.96
19867--20055
54
3.5
53
78
5
200
35
20
16
27
1.94
20171--20600
37
11.6
37
74
4
339
46
13
15
24
1.82
20155--20609
74
6.1
74
83
3
531
45
13
16
24
1.83

Tables:   1

The End!