Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018348.1 Corchorus olitorius cultivar O-4 contig18381, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23077

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
374--416
16
2.7
15
89
10
68
11
6
13
67
1.41
4124--4230
53
2.0
54
92
1
180
39
6
7
46
1.58
5579--5614
18
2.1
17
90
10
56
22
27
13
36
1.92
10521--10551
12
2.7
11
95
5
53
3
9
25
61
1.42
15391--15513
61
2.0
61
98
0
237
20
13
30
35
1.91
16636--16671
17
2.1
17
89
0
54
63
5
16
13
1.47

Tables:   1

The End!