Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018357.1 Corchorus olitorius cultivar O-4 contig18390, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  91429

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11066--11146
40
2.0
40
92
0
135
40
17
13
28
1.87
11248--11277
13
2.3
13
94
0
51
33
6
46
13
1.69
34904--34929
2
13.0
2
100
0
52
50
0
0
50
1.00
41288--41327
21
1.9
21
94
0
71
32
22
10
35
1.87
56602--56630
15
1.9
15
100
0
58
37
0
13
48
1.43
63312--63357
8
5.8
8
92
5
67
76
2
13
8
1.11
65679--65718
21
1.9
21
100
0
80
15
27
30
27
1.96
72706--72867
60
2.7
60
86
1
209
33
16
20
30
1.94
72702--72867
31
5.5
30
68
16
92
32
16
20
30
1.94
72907--73068
60
2.7
60
82
1
191
29
17
15
37
1.91
75980--76057
38
2.1
38
100
0
156
47
12
21
17
1.81
78398--78449
27
1.9
27
88
0
77
40
0
13
46
1.43
83534--83576
11
3.7
11
82
11
59
67
2
30
0
1.03

Tables:   1

The End!