Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018366.1 Corchorus olitorius cultivar O-4 contig18399, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1078

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
88--636
38
13.2
38
69
19
214
31
20
27
20
1.97
129--1077
48
21.7
48
69
20
339
33
19
27
19
1.96
1--556
134
4.3
133
84
6
669
32
19
28
19
1.97
687--760
38
1.9
38
91
0
121
28
17
27
27
1.98
566--953
134
2.9
132
87
2
535
32
18
28
20
1.96
774--1027
86
3.0
86
85
3
325
34
19
27
18
1.95
640--1076
220
2.0
220
85
3
585
34
19
27
18
1.96
910--988
38
2.1
38
90
0
122
37
17
27
16
1.91

Tables:   1

The End!