Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018372.1 Corchorus olitorius cultivar O-4 contig18405, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51575

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4780--5182
133
3.0
133
99
0
788
42
15
19
22
1.88
6899--6939
20
2.0
21
95
4
75
43
0
0
56
0.99
6894--6936
18
2.4
18
84
11
61
46
0
0
53
1.00
6893--6939
20
2.4
18
77
16
58
44
0
0
55
0.99
7406--7583
91
1.9
91
84
5
234
38
10
10
40
1.74
21049--21083
2
17.5
2
100
0
70
48
0
0
51
1.00
27205--27252
18
2.6
19
80
9
64
25
6
12
56
1.59
35847--35888
2
21.0
2
100
0
84
0
0
50
50
1.00

Tables:   1

The End!