Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018374.1 Corchorus olitorius cultivar O-4 contig18407, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32277

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2622--2647
7
3.7
7
100
0
52
38
15
15
30
1.88
3756--3792
19
2.0
19
89
5
58
35
0
0
64
0.94
15688--15712
6
4.2
6
100
0
50
36
32
32
0
1.58
24144--24244
33
3.1
33
95
0
175
18
35
32
12
1.89
24324--24379
29
2.0
28
92
3
94
28
10
21
39
1.87
25540--25578
6
6.5
6
87
0
51
5
0
46
48
1.24
25540--25578
18
2.2
18
90
0
60
5
0
46
48
1.24
25931--25960
15
2.0
15
100
0
60
33
0
13
53
1.40
30585--30634
6
8.3
6
95
0
73
22
16
60
2
1.46
31132--31201
33
2.0
35
83
8
90
50
12
0
37
1.41

Tables:   1

The End!