Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018376.1 Corchorus olitorius cultivar O-4 contig18409, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43852

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2145
325
6.5
322
82
8
2427
34
16
15
33
1.91
1--2145
668
3.3
649
84
7
2591
34
16
15
33
1.91
1--2145
984
2.2
978
84
7
2701
34
16
15
33
1.91
2175--2215
21
2.0
21
90
0
64
31
7
36
24
1.83
2867--3015
73
2.0
73
100
0
298
44
14
16
24
1.85
6936--6974
2
19.5
2
100
0
78
48
0
0
51
1.00
15591--15868
139
2.0
139
97
0
529
30
17
26
25
1.98
30612--30636
6
4.2
6
100
0
50
52
48
0
0
1.00
37574--37642
29
2.4
29
97
0
129
31
21
27
18
1.97
41975--42032
28
2.1
28
87
6
82
56
13
6
22
1.61
42502--42535
6
5.7
6
96
0
50
44
50
5
0
1.26

Tables:   1

The End!