Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018380.1 Corchorus olitorius cultivar O-4 contig18413, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20797

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5581--5650
31
2.3
30
83
9
88
42
10
8
38
1.69
6075--6114
15
2.6
16
92
4
64
60
12
10
17
1.59
7777--7864
11
8.5
11
66
14
53
48
0
3
47
1.18
7780--7864
30
2.8
30
94
0
152
48
0
3
48
1.18
7853--7885
7
4.7
7
100
0
66
69
0
0
30
0.88
7851--7929
7
9.9
8
76
17
51
59
0
2
37
1.11
12580--12638
29
2.1
29
83
3
75
47
13
18
20
1.82
18778--18839
27
2.6
25
77
22
62
64
3
0
32
1.09
18801--18954
3
51.7
3
66
14
52
61
7
1
29
1.30
20426--20461
18
1.9
19
88
5
56
58
8
0
33
1.28
20479--20516
14
2.8
14
88
4
60
55
2
0
42
1.14

Tables:   1

The End!