Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018385.1 Corchorus olitorius cultivar O-4 contig18418, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38120

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
530--557
2
14.0
2
100
0
56
50
0
0
50
1.00
1161--1282
41
3.0
41
96
1
219
40
18
11
28
1.86
8500--8600
21
4.8
21
91
0
103
25
31
29
12
1.93
8508--8600
42
2.2
42
96
0
168
23
33
29
13
1.94
10215--10256
20
2.1
20
86
0
57
4
45
2
47
1.36
13963--14021
17
3.4
17
66
25
50
32
18
15
33
1.92
13964--14036
36
2.0
36
100
0
146
31
16
16
35
1.91
19131--19218
44
2.0
44
100
0
176
34
13
13
38
1.84

Tables:   1

The End!