Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018390.1 Corchorus olitorius cultivar O-4 contig18423, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23099

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
163--221
29
2.0
29
96
0
109
40
8
27
23
1.83
5162--5251
29
3.1
29
88
0
135
46
7
23
22
1.77
6489--6598
37
3.0
37
95
0
193
32
19
11
36
1.88
9907--9931
2
12.5
2
100
0
50
48
0
0
52
1.00
11410--11486
37
2.1
37
95
0
136
33
19
11
35
1.88
12386--12410
13
1.9
13
100
0
50
64
0
0
36
0.94
17760--17820
12
5.1
12
77
18
56
45
1
1
50
1.21
17757--17820
26
2.7
23
80
15
76
46
1
1
50
1.20
23041--23076
14
2.6
13
87
12
54
88
0
11
0
0.50

Tables:   1

The End!