Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018391.1 Corchorus olitorius cultivar O-4 contig18424, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17995

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--40
2
20.0
2
100
0
80
50
0
0
50
1.00
2213--2250
11
3.5
11
89
10
51
39
0
2
57
1.12
6232--6257
2
13.0
2
100
0
52
50
0
0
50
1.00
7626--7651
13
2.0
13
100
0
52
61
0
0
38
0.96
8134--8162
15
1.9
15
100
0
58
41
3
0
55
1.17
8721--8756
2
18.0
2
100
0
72
50
0
0
50
1.00
13579--13614
19
1.9
18
94
5
63
25
5
16
52
1.65
17682--17988
161
1.9
162
88
2
465
31
21
19
28
1.97

Tables:   1

The End!