Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018393.1 Corchorus olitorius cultivar O-4 contig18426, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17146

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1483--1933
228
2.0
223
90
4
699
33
10
22
33
1.88
10611--10645
6
5.8
6
86
0
52
11
31
40
17
1.85
10611--10644
12
2.8
12
100
0
68
8
32
41
17
1.80
10601--10645
18
2.5
18
85
0
54
13
31
37
17
1.89
11272--11357
36
2.4
36
80
7
111
18
27
18
34
1.95
11475--11690
39
5.6
39
83
3
240
15
25
27
31
1.95
16941--17011
4
17.8
4
91
0
79
40
0
9
49
1.36
16941--17011
6
11.8
6
84
0
79
40
0
9
49
1.36
16941--17011
20
3.5
20
90
0
88
40
0
9
49
1.36

Tables:   1

The End!