Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018394.1 Corchorus olitorius cultivar O-4 contig18427, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62855

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8--47
2
20.0
2
100
0
80
50
0
0
50
1.00
1601--1632
2
16.0
2
100
0
64
0
50
0
50
1.00
17994--18950
22
43.6
22
68
14
272
35
16
9
38
1.81
18148--18254
45
2.4
45
80
10
121
38
15
8
37
1.78
18662--18745
21
3.8
21
78
18
64
36
13
9
40
1.77
18812--18862
26
2.0
26
92
0
84
47
17
5
29
1.71
18982--19191
22
9.5
22
69
17
130
39
18
9
33
1.82
18983--19191
66
3.1
67
83
5
262
38
18
9
33
1.82
22342--22398
22
2.4
23
72
18
55
43
0
1
54
1.10
24567--24637
32
2.2
32
75
9
74
33
12
18
35
1.89
40090--40119
15
1.9
16
93
6
53
16
6
6
70
1.31
43034--43063
13
2.3
13
100
0
60
26
13
13
46
1.80
49273--49843
297
1.9
294
92
1
946
23
16
17
42
1.88
51717--51745
14
2.1
14
100
0
58
0
13
0
86
0.58
62131--62178
22
2.1
23
88
3
71
52
2
2
43
1.24

Tables:   1

The End!