Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018397.1 Corchorus olitorius cultivar O-4 contig18430, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9264

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1585--1669
30
2.8
31
91
7
138
21
5
18
54
1.65
1576--1672
30
3.2
29
83
11
115
20
5
17
56
1.59
1780--1819
21
1.9
21
85
10
55
27
17
0
55
1.43
5292--5370
26
3.1
26
62
3
61
39
11
31
17
1.85
5291--5498
54
3.9
54
91
1
323
45
14
25
14
1.83
6067--6093
13
2.1
13
100
0
54
29
7
44
18
1.77
6644--6683
17
2.4
17
87
8
55
25
10
25
40
1.86
6720--6765
24
2.0
24
87
12
69
15
6
26
52
1.67

Tables:   1

The End!