Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018404.1 Corchorus olitorius cultivar O-4 contig18437, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15087

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2592--2661
28
2.5
28
81
6
79
42
11
14
31
1.81
2591--2668
28
2.8
28
78
5
77
41
11
14
33
1.81
3447--3472
2
13.0
2
100
0
52
50
0
0
50
1.00
3888--3912
11
2.3
11
100
0
50
16
0
64
20
1.30
11109--11139
12
2.5
13
94
5
55
38
12
29
19
1.89
11499--11571
25
2.9
25
89
0
119
45
10
17
26
1.82
13669--13722
19
2.6
21
77
19
60
38
3
18
38
1.69
14648--14672
13
1.9
13
100
0
50
60
8
0
32
1.26
14657--14707
22
2.3
22
80
6
59
66
9
3
19
1.36

Tables:   1

The End!