Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018406.1 Corchorus olitorius cultivar O-4 contig18439, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50076

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2783--2840
29
2.0
29
100
0
116
31
6
13
48
1.69
6475--6608
33
4.1
33
86
2
162
9
38
41
10
1.72
14499--14611
42
2.7
42
97
0
217
23
24
23
28
2.00
17785--17810
3
8.7
3
100
0
52
69
0
0
30
0.89
42865--43066
108
1.9
106
84
5
264
42
8
6
42
1.62
43822--43873
26
2.0
26
96
0
95
38
0
21
40
1.53
45199--45489
66
4.5
64
84
7
284
39
16
19
24
1.91
45234--46024
67
11.9
66
80
8
643
40
14
20
24
1.90
45244--46024
135
5.9
133
79
8
670
40
14
20
24
1.90

Tables:   1

The End!