Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018410.1 Corchorus olitorius cultivar O-4 contig18443, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25705

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1059--1128
36
1.9
36
91
0
113
21
10
8
60
1.55
3626--3686
18
3.0
22
69
18
67
39
1
9
49
1.46
3924--3967
2
22.0
2
81
9
54
50
0
6
43
1.29
3924--3959
17
2.1
17
89
0
54
50
0
5
44
1.25
6943--6991
26
1.9
26
88
12
75
57
0
0
42
0.99
9446--9484
20
2.0
19
85
5
51
51
0
30
17
1.46
10919--10961
16
2.7
15
82
10
50
79
2
16
2
0.95
13601--13654
23
2.3
23
96
3
99
16
25
22
35
1.95
20132--20162
16
1.9
16
93
0
53
64
0
35
0
0.94
21735--22361
50
12.7
50
92
1
1007
19
24
15
40
1.91
24289--24484
21
9.3
21
82
0
248
25
13
27
34
1.93
24285--24496
42
5.0
42
95
0
379
26
14
25
33
1.95
24611--24663
21
2.5
21
82
11
72
35
20
16
26
1.94

Tables:   1

The End!