Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018413.1 Corchorus olitorius cultivar O-4 contig18446, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17475

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1881--1919
21
1.9
21
84
5
53
30
25
2
41
1.69
2165--2224
24
2.5
24
91
0
93
30
13
3
53
1.56
4205--4258
24
2.2
24
83
6
65
42
1
1
53
1.22
4218--4269
24
2.2
24
82
6
61
42
5
0
51
1.25
5049--5110
30
2.1
30
96
0
115
45
4
24
25
1.73
8218--8253
18
2.0
18
100
0
72
16
11
16
55
1.68

Tables:   1

The End!