Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018417.1 Corchorus olitorius cultivar O-4 contig18450, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25188

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3129--3167
20
2.0
20
85
10
53
28
0
2
69
1.02
3561--3633
36
2.0
36
97
0
137
21
12
10
54
1.68
3771--4093
178
1.8
178
89
5
510
35
13
15
34
1.88
11258--11712
179
2.6
178
80
4
497
33
14
16
35
1.89
12527--12552
2
13.0
2
100
0
52
50
0
0
50
1.00
12996--13115
60
2.0
60
100
0
240
21
31
23
23
1.98
13007--13107
29
3.4
29
73
10
114
20
30
23
24
1.99
18063--18092
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!