Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01001842.1 Corchorus olitorius cultivar O-4 contig01842, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1005

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48--111
27
2.2
30
81
10
80
23
12
0
64
1.28
45--101
7
8.1
7
78
5
62
24
12
0
63
1.29
39--110
14
5.1
14
81
10
76
23
11
0
65
1.25
59--116
22
2.6
22
76
13
57
27
10
0
62
1.28
118--146
14
2.1
14
100
0
58
37
0
13
48
1.43
185--209
12
2.1
12
100
0
50
40
0
16
44
1.47
183--229
13
3.6
13
83
13
53
34
2
14
48
1.56

Tables:   1

The End!