Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018422.1 Corchorus olitorius cultivar O-4 contig18455, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11362

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
116--182
30
2.2
30
97
0
125
41
11
13
32
1.81
643--671
15
2.0
15
93
6
51
62
13
6
17
1.52
2554--2760
102
2.0
102
99
0
405
35
17
13
33
1.89
9639--9778
44
3.2
44
78
7
142
37
15
11
36
1.83
9639--9778
22
6.4
22
79
8
117
37
15
11
36
1.83
9895--9957
22
2.8
22
85
7
74
34
25
1
38
1.66
9915--9967
22
2.4
22
83
0
61
32
22
7
37
1.82
10001--10080
22
3.6
22
73
5
63
35
11
10
43
1.74
10045--10184
22
6.4
22
78
4
122
34
12
12
41
1.79
10045--10184
44
3.2
44
82
2
156
34
12
12
41
1.79

Tables:   1

The End!