Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018439.1 Corchorus olitorius cultivar O-4 contig18472, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49871

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2461--2491
9
3.4
9
100
0
62
22
9
22
45
1.81
6667--6726
27
2.3
26
79
2
66
46
13
5
35
1.65
14087--14150
21
3.1
21
80
8
78
34
12
20
32
1.90
14093--14150
19
2.9
20
82
7
73
34
12
20
32
1.90
20778--20812
4
8.8
4
93
0
52
71
0
28
0
0.86
25626--25693
22
3.1
22
74
6
75
72
7
4
16
1.24
31282--31328
21
2.2
21
96
0
85
46
6
17
29
1.72
32678--32737
30
2.0
30
93
0
102
10
46
23
20
1.80
39061--39197
68
2.0
68
98
0
265
34
18
16
31
1.93
46344--46424
39
2.1
37
82
11
92
14
20
13
50
1.77

Tables:   1

The End!