Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018443.1 Corchorus olitorius cultivar O-4 contig18476, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15887

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--35
2
17.5
2
100
0
70
48
0
0
51
1.00
1177--1620
178
2.5
177
83
2
530
35
15
15
34
1.88
9827--9885
30
2.0
30
83
6
75
25
11
27
35
1.91
9993--10027
16
2.2
16
94
0
61
51
2
0
45
1.16
11224--11267
22
2.0
22
90
0
70
15
6
2
75
1.12
12292--12419
28
4.5
28
90
2
202
13
17
24
44
1.85
12292--12419
57
2.2
57
91
2
204
13
17
24
44
1.85

Tables:   1

The End!