Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018444.1 Corchorus olitorius cultivar O-4 contig18477, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44264

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6115--6183
23
3.2
21
73
21
63
47
7
20
24
1.75
6123--6186
20
3.2
19
73
20
58
50
3
21
25
1.64
13411--13441
2
15.5
2
100
0
62
48
0
0
51
1.00
19729--19769
19
2.1
20
90
4
66
48
12
7
31
1.68
20786--20820
3
11.7
3
100
0
70
0
31
0
68
0.90
21070--21116
22
2.1
22
100
0
94
36
4
12
46
1.62
30701--30737
13
2.8
13
87
0
56
16
43
8
32
1.77
30731--30816
40
2.1
40
86
2
127
41
20
10
26
1.85
31116--31176
33
1.9
32
87
9
90
24
16
6
52
1.67
33009--34356
677
2.0
676
92
1
2240
41
16
14
27
1.87
37623--37650
2
14.0
2
100
0
56
50
0
0
50
1.00
38263--38306
20
2.2
20
84
8
54
59
2
6
31
1.36
39659--39713
17
3.2
17
75
10
67
23
10
18
47
1.80
39710--39776
23
3.2
23
61
30
58
25
14
13
46
1.82
39686--39792
40
2.7
40
92
0
178
26
14
14
44
1.83
40036--40115
12
6.6
12
88
8
126
25
25
16
33
1.95

Tables:   1

The End!