Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018447.1 Corchorus olitorius cultivar O-4 contig18480, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41232

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
596--633
19
2.0
19
94
0
67
47
18
0
34
1.49
7164--7211
19
2.5
18
86
10
60
2
22
4
70
1.15
11735--11859
22
5.7
22
74
11
105
42
12
8
36
1.73
11735--11839
43
2.4
44
82
7
126
40
14
8
36
1.76
21293--21323
14
2.3
13
94
5
53
35
12
6
45
1.68
23755--23788
2
17.0
2
100
0
68
50
0
0
50
1.00
25062--25144
39
2.1
38
91
8
132
30
4
19
45
1.71
25295--25342
23
2.0
24
84
8
62
45
4
22
27
1.70
27881--28181
31
9.7
30
87
4
350
30
17
18
32
1.95
28317--28417
48
2.1
48
96
0
184
47
23
12
15
1.80
28379--28414
18
2.0
18
88
0
54
50
25
13
11
1.75
29329--29382
22
2.3
24
81
12
60
24
22
5
48
1.72
33483--33507
8
3.1
8
100
0
50
12
0
40
48
1.40
34442--34485
21
2.2
20
84
12
54
54
0
6
38
1.27
39220--39639
209
2.0
209
94
1
734
31
18
9
40
1.83

Tables:   1

The End!