Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018460.1 Corchorus olitorius cultivar O-4 contig18493, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86721

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10639--10734
47
2.0
47
100
0
192
29
8
18
43
1.79
19016--19092
40
1.9
40
86
0
109
37
7
25
28
1.84
22486--22513
2
14.0
2
100
0
56
50
0
0
50
1.00
36940--36991
27
1.9
27
92
7
88
11
13
34
40
1.81
41010--41103
45
2.2
44
83
11
115
39
19
4
37
1.71
42072--42115
3
14.7
3
95
0
79
65
2
0
31
1.05
46445--46480
16
2.4
16
90
9
58
0
22
5
72
1.05
46868--46908
19
2.0
20
86
9
57
31
19
9
39
1.84
73184--73297
57
2.0
57
98
0
219
34
12
13
40
1.81

Tables:   1

The End!