Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018464.1 Corchorus olitorius cultivar O-4 contig18497, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42013

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1809--1848
2
20.5
2
92
5
64
55
0
0
45
0.99
3694--3720
2
13.5
2
100
0
54
48
0
0
51
1.00
7590--7623
1
34.0
1
93
0
59
0
2
0
97
0.19
14823--14985
80
2.0
80
97
0
308
21
11
14
52
1.72
16053--16102
21
2.5
20
77
6
55
20
6
6
68
1.33
23512--23553
21
2.0
21
85
0
57
11
42
9
35
1.74
26120--26188
30
2.3
30
87
2
102
23
15
26
34
1.95
31998--32085
33
2.7
32
85
3
122
51
30
2
15
1.56
37427--37455
2
14.5
2
100
0
58
51
0
0
48
1.00
39405--39545
31
4.5
31
85
1
149
17
20
23
39
1.92

Tables:   1

The End!