Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018465.1 Corchorus olitorius cultivar O-4 contig18498, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27229

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1768--1908
31
4.5
31
85
1
149
17
20
23
39
1.92
7255--7571
149
2.1
148
90
2
483
21
17
28
32
1.96
7272--7571
74
4.0
74
92
1
476
21
17
29
32
1.96
15457--15950
186
2.5
193
84
11
591
31
17
17
33
1.94
16506--16622
57
2.0
60
85
5
159
43
8
10
37
1.69
18828--18996
54
3.1
54
74
2
176
39
21
18
20
1.92
23037--23078
14
3.1
14
76
13
52
16
23
0
59
1.37
23335--23505
91
1.9
93
90
2
274
37
16
11
33
1.86
26870--27025
69
2.2
70
86
5
219
26
23
30
20
1.99

Tables:   1

The End!