Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018475.1 Corchorus olitorius cultivar O-4 contig18508, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27021

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2594--2634
20
2.0
21
86
13
59
56
2
2
39
1.26
2671--2699
2
14.5
2
100
0
58
51
0
0
48
1.00
3397--3425
15
1.9
15
100
0
58
55
0
10
34
1.34
13256--13302
8
5.8
8
87
2
67
72
0
12
14
1.13
13254--13295
17
2.4
18
77
22
54
69
0
14
16
1.20
13262--13315
24
2.4
22
87
9
74
72
0
16
11
1.12
18410--18472
31
2.0
32
84
6
83
42
26
6
23
1.78
20422--20451
2
15.0
2
92
0
51
46
0
3
50
1.18
21154--21195
19
2.2
19
91
8
68
83
0
16
0
0.65
21150--21193
23
2.0
22
95
4
79
84
0
15
0
0.63
22891--22922
11
2.6
13
90
9
50
21
0
9
68
1.17

Tables:   1

The End!