Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018477.1 Corchorus olitorius cultivar O-4 contig18510, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1771

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
239--344
22
4.8
22
77
9
99
37
13
16
32
1.88
215--339
44
2.8
44
85
4
155
41
12
12
32
1.81
369--428
22
2.7
22
81
0
66
40
6
21
31
1.79
365--441
22
3.5
23
78
8
63
38
6
18
36
1.76
490--685
22
8.9
23
70
14
78
31
11
16
40
1.85
554--688
22
6.3
21
76
5
92
33
12
15
38
1.85

Tables:   1

The End!