Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018479.1 Corchorus olitorius cultivar O-4 contig18512, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25534

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1257--1433
96
1.8
96
97
0
336
27
11
28
32
1.92
1499--1555
25
2.3
25
87
6
80
40
5
3
50
1.42
1490--1666
97
1.9
94
84
3
237
33
6
3
55
1.43
1715--2893
334
3.6
331
81
5
1352
32
15
17
34
1.90
3140--3185
12
3.9
12
83
11
51
41
4
2
52
1.33
9370--9532
78
2.1
78
89
0
254
50
0
14
33
1.48
14311--14358
19
2.5
19
76
6
53
47
0
0
52
1.00
15580--15739
50
3.6
42
79
15
151
21
8
21
48
1.77
15576--15687
21
5.2
21
76
8
127
22
8
21
48
1.76
15641--15739
50
2.0
50
97
0
189
22
8
21
48
1.76
18241--18273
7
4.7
7
96
0
57
12
18
9
60
1.57
18241--18280
21
1.9
21
84
0
53
15
20
7
57
1.61
25116--25160
21
2.1
21
83
0
54
28
31
24
15
1.96

Tables:   1

The End!