Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018482.1 Corchorus olitorius cultivar O-4 contig18515, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37134

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--90
2
45.5
2
93
2
155
0
53
0
46
1.00
67--106
18
2.2
18
90
0
62
0
67
0
32
0.91
4125--4509
212
1.8
211
88
4
589
20
15
17
47
1.83
6255--6298
22
2.1
20
83
8
52
13
31
43
11
1.80
7975--8032
26
2.2
26
85
11
75
65
12
10
12
1.47
8301--8336
19
1.9
18
88
5
54
77
5
2
13
1.05
12396--12439
22
2.1
20
83
8
52
13
31
43
11
1.80
33569--33593
11
2.3
11
100
0
50
16
0
16
68
1.22

Tables:   1

The End!