Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018483.1 Corchorus olitorius cultivar O-4 contig18516, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30458

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7778--7802
9
2.8
9
100
0
50
48
0
8
44
1.32
8081--8126
24
1.9
24
95
0
83
39
8
0
52
1.33
7929--8124
103
1.9
103
87
4
288
42
9
3
44
1.51
9147--9188
22
1.9
22
95
0
75
38
9
7
45
1.64
12292--12375
42
2.0
42
100
0
168
28
19
21
30
1.97
23605--23702
51
1.9
51
80
12
112
22
21
14
41
1.89
29961--29999
17
2.3
17
86
0
51
17
35
7
38
1.79

Tables:   1

The End!