Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018492.1 Corchorus olitorius cultivar O-4 contig18525, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55036

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
510--561
23
2.2
24
80
19
65
69
1
23
5
1.20
9253--9285
6
5.7
6
96
3
59
15
0
0
84
0.61
9391--9458
35
1.9
35
84
0
91
4
41
39
14
1.66
9515--9564
12
4.5
11
80
9
57
2
22
0
76
0.89
16173--16216
20
2.2
20
83
4
52
61
2
29
6
1.34
22365--22423
21
2.8
20
79
7
55
10
25
5
59
1.50
25114--25139
2
13.0
2
100
0
52
50
0
50
0
1.00
27824--27867
17
2.6
16
83
16
54
6
43
4
45
1.51
44188--44323
35
3.9
35
91
0
218
36
12
16
34
1.87
44188--44274
16
5.1
16
67
15
57
35
11
16
36
1.84
44202--44323
16
6.9
18
63
16
58
37
11
17
33
1.85
51570--51606
18
2.0
19
89
5
58
37
2
21
37
1.68
52206--52242
18
2.1
18
89
0
56
13
13
10
62
1.55

Tables:   1

The End!