Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018495.1 Corchorus olitorius cultivar O-4 contig18528, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6725

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1985--2028
21
2.0
21
82
4
52
43
9
27
20
1.82
3653--3695
9
4.8
9
88
8
61
76
0
13
9
1.01
3748--3796
13
3.7
13
83
2
62
32
10
12
44
1.75
5475--5615
69
2.0
69
87
0
201
26
25
16
31
1.96
5883--6190
149
2.1
150
88
1
456
27
21
16
34
1.95
6235--6691
38
12.2
38
73
15
290
26
13
15
45
1.83
6316--6382
32
2.1
32
88
0
98
25
16
14
43
1.86
6286--6420
70
1.9
70
87
3
200
25
12
15
46
1.81
6240--6458
108
2.0
108
83
3
271
25
13
16
44
1.85
6614--6692
39
2.0
39
82
0
95
30
13
13
41
1.84

Tables:   1

The End!