Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018501.1 Corchorus olitorius cultivar O-4 contig18534, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41459

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16388--16433
1
46.0
1
82
0
56
0
0
8
91
0.43
16388--16432
14
3.3
14
90
3
74
0
0
8
91
0.43
16388--16431
13
3.3
13
93
6
79
0
0
9
90
0.44
19219--19468
30
8.3
30
90
1
295
31
24
32
11
1.91
26015--26041
3
9.0
3
100
0
54
33
0
0
66
0.92
32298--32385
42
2.1
42
95
0
158
6
18
17
57
1.60
33963--34000
2
19.0
2
100
0
76
50
0
0
50
1.00
35195--35221
4
6.8
4
100
0
54
51
22
0
25
1.48
37677--37736
22
2.7
22
87
5
77
35
15
11
38
1.83
37800--37845
22
2.1
22
88
8
67
26
23
4
45
1.71
37840--37913
22
3.3
22
85
10
98
36
16
9
37
1.81
37814--37913
45
2.2
45
84
5
123
35
17
9
39
1.81
37805--37913
22
4.9
21
79
12
94
33
20
8
37
1.82
37934--37995
22
3.0
21
76
4
63
37
16
9
37
1.81
38322--38369
21
2.3
21
96
0
87
39
6
33
20
1.78

Tables:   1

The End!