Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01018510.1 Corchorus olitorius cultivar O-4 contig18543, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33667

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1828--2227
220
1.8
220
88
2
615
20
24
12
42
1.87
3298--3324
7
3.9
7
100
0
54
29
25
29
14
1.95
7267--7299
15
2.2
15
89
10
50
57
6
36
0
1.23
9421--9574
75
2.1
75
88
3
231
50
0
14
34
1.47
11966--11990
7
3.6
7
100
0
50
0
24
0
76
0.80
12003--12036
2
17.5
2
93
6
61
47
0
0
52
1.00
18848--19601
55
13.6
55
87
4
931
25
19
6
48
1.72
18963--19579
340
1.8
338
89
3
963
24
19
6
48
1.73
19627--19696
22
3.2
22
82
6
72
15
27
2
54
1.56
28991--29086
50
1.9
50
91
0
156
22
14
28
34
1.94

Tables:   1

The End!